Japan in 13 Days: 4 Recommended 13-day Itineraries to Japan

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Japan 13-day itinerary options
Not sure if 13 days in Japan is feasible? Check out our 13-day Japan itinerary ideas below.
Itinerary #1: Cherry Blossom Tour


Overview | Activity | |
Day 1 | Arrive in Tokyo | |
Day 2 | Enjoy Tokyo with Sumida River cruise, stroll through Hamarikyu Gardens, visit the Ginza Shopping District and Shibuya Crossing | Outdoor exploration |
Day 3 | Travel to Matsumoto, discover its famous castle, and stay overnight in a traditional ryokan | Cultural exploration |
Day 4 | En route to Takayama, pit stop at Daio Wasabi Farm and Hida Folk Village | Exploration |
Day 5 | Rise in Takayama, visit a morning market and the Old Quarter | City exploration |
Day 6 | Transfer to Kanazawa, explore Nagamachi District; take pictures amidst the sakuras of Kenroku-en garden | Garden visit |
Day 7 | Catch the train to Kyoto and tour Sanjusangendo Temple and Fushimi Inari Shrine | Temple visits |
Day 8 | Travel to and from Hiroshima on the bullet train | Train journey |
Day 9 | Discover Kinkaku-ji Temple, enjoy a walking tour of Nijo Castle and Gion district, ending the day at a theater | Walking |
Day 10 | Journey to Fuji-Hakone-Izu National Park via bullet rain | Outdoor exploration |
Day 11 | Cruise across Lake Ashi to Moto-Hakone and spot Mount Fuji | Lake cruise |
Day 12 | Head back to the capital and pay your respect at Senso-ji Temple | Temple visit |
Day 13 | Say Bai Bai to Tokyo |
Planning a trip to Japan anywhere between March and May? This time of year is when the country’s famous cherry blossoms come out to play, and this 13-day itinerary is centered around some of the best sakura hot spots, like Tokyo, Kyoto, Kanazawa and Fuji Five Lakes. But even if it’s not cherry blossom season, these two weeks can still be filled with plenty of beauty, magic and quintessential Japanese traditions. Visit a wasabi farm and try wasabi beer, taste sake in Takayama, enjoy onsen spas, see how samurais lived in Nagamachi, and revel in geisha moments on stage. See all 13-day tours in Japan.
Itinerary #2: Highlights of Japan

Overview | Activity | |
Day 1 | Kickstart your venture in the Japanese capital city | City sightseeing |
Day 2 | Enjoy a full day of city sightseeing | City sightseeing |
Day 3 | Depart Tokyo, explore the cities of Kamakura and Hakone | City sightseeing |
Day 4 | Adventure to a green tea plantation in Nihondaira, tour a miso factory and spend the evening in Iga | Outdoor exploration |
Day 5 | Check out the Ninja Museum of Igaryu, then head to Katsuragi City Sumo Museum Kehayaza, continue to Osaka | Museum exploration |
Day 6 | En route to Hiroshima, stop at Himeji Castle | Exploration |
Day 7 | Learn about Hiroshima’s WWII past and ferry to Itsukushima Shrine | History and culture exploration |
Day 8 | Leave for Kurashiki, then continue onwards to Kyoto | City sightseeing |
Day 9 | Wake in Kyoto and head to the Arashiyama Bamboo Forest | Outdoor exploration |
Day 10 | Check out Hikone, then arrive in Takayama and fall in love with its Sanmachi Historic District | City sightseeing |
Day 11 | Tour Hida no Sato Open Air Museum and Shirakawa-go Village, then Kanazawa‘s Kenrokuen Garden | Cultural exploration |
Day 12 | Rise in Kanazawa and explore it before catching the train to Tokyo | City sightseeing |
Day 13 | Wish new friends safe travels in Japan’s capital |
Simply put, this 13-day Japan itinerary plan is a chock-a-block of adventure and exploration, encapsulating Japan’s culinary and cultural highlights. From traversing past rolling tea plantations to sampling sweet mikan mandarins straight from the branches to learning all about miso production, this 13 days in Japan itinerary will certainly tug on the heartstrings of any culinary geek. There are also plenty of sightseeing excursions, including sites like Kyoto’s ancient temples and shrines, Tokyo’s anime and manga district, and Hiroshima’s important museums. See all Japan food tours.
Itinerary #3: Cycle Japan


Overview | Activity | |
Day 1 | Land in the former ancient capital | |
Day 2 | Cycle around Kyoto, including along the Philosopher's Path and the Kamo River | Biking |
Day 3 | Catch the train to Kanazawa and bike to its Kenrokuen Garden | Biking |
Day 4 | Cycle along coastal Noto Peninsula to Chirihama Beach, Hakui | Biking |
Day 5 | Continue north on the Noto Peninsula, through Ganmon National Park to Sōji-ji Temple, ending in Wajima | Biking |
Day 6 | Explore the Wajima morning market, then cycle northeast and stay overnight at a ryokan in Suzu | Biking |
Day 7 | Travel down east by bicycle to Noto Ushitsu | Biking |
Day 8 | Discover Nanao Bay, then rejuvenate at Wakura Onsen hot spring resort | Biking |
Day 9 | Veer inland on the longest stretch to Toyama and the Shogawa Onsen Area | Biking |
Day 10 | Rise in Toyama, bike through Shogawa River Valley to Shirakawa-go village, and stay overnight | Biking |
Day 11 | Catch the bus to Kanazawa, then bullet train to Tokyo | Transfer |
Day 12 | Enjoy a free day to explore the capital city at your leisure | City sightseeing |
Day 13 | Wave goodbye to Tokyo |
One of the most authentic ways to experience Japan is to travel from coast to coast on an epic bicycle tour. With this 13-day Japan cycle tour, you will start in west-side Kyoto and pedal your way up north, following the coast as a guide. On Day 6, you’ll begin the descent from Suzu (the northeastern tip of the Noto Peninsula on the Sea of Japan) down the east side of Japan, headed for Tokyo. Before ending in the capital city, venture slightly inland on Day 9 from the east coast, passing rice paddies and mountain peaks. Finally, give your legs a much-deserved break after Day 10, when the bulk of your cycling part ends, and the rest is smooth sailing on trains. Don’t forget to eat as much seafood as possible in between, and there are also onsen stops along the way to rejuvenate tired muscles. See all Japan cycling holidays.
Itinerary #4: Tokyo, Hiroshima & Nagano

Overview | Activity | |
Day 1 | Say hello to Tokyo! | |
Day 2 | Discover Sensoji Temple, Harajuku and Shibuya districts with your chaperone | Cultural exploration |
Day 3 | Day trip to Kamakura and enjoy tea tastings | Tasting |
Day 4 | Tour Ueno Park and its Tokyo National Museum with your guide, with rest of the day free | Landmark visits |
Day 5 | Head to Lake Kawaguchi within Fuji Hakone Izu National Park, ride the aerial lift up Mount Tenjo and stay overnight at a ryokan in Kawaguchi | Outdoor exploration |
Day 6 | Hike around the lake, catch the bus to Mishima, then bullet train to Kyoto | Hiking |
Day 7 | Go to Sanjūsangen-dō Temple and Golden Pavilion. Explore Kyoto in the afternoon | Temple visits |
Day 8 | Depart from Hiroshima, pit stopping to explore Himeji Castle | Cultural exploration |
Day 9 | Enjoy a ferry crossing to Miyajima Island, then back in Hiroshima | Cultural exploration |
Day 10 | Travel via train through Nagoya to Nagano and explore on your own | Exploration |
Day 11 | Wander around the Yudanaka Onsen area and Snow Monkey Park | Outdoor exploration |
Day 12 | Leave Nagano for Tokyo, stopping at Matsumoto Castle | Cultural exploration |
Day 13 | Say your farewells in the capital city |
Highlighting the surroundings between Tokyo and Mount Fuji for the first leg of this journey, then around Kyoto and the inland seas of Hiroshima, and then exploring some of Japan’s tallest mountain ranges in the Nagano region for the second half, this 13-day Japan tour is designed to show you the country’s diverse landscapes. Shop ‘til you drop in Tokyo, photograph coastal Kamakura’s famous Giant Buddha, and drink in the views of Mount Fuji from cable car vantage points. Slurp back Hiroshima oysters and spot a unique “floating” torii gate at its neighbor isle. While in Nagano, meet the cute snow monkeys, slurp up the famous soba noodles and frolic in the snow. The tour starts and ends in the capital city.
Planning a Japan itinerary for 13 days?
Japan is a fantastic holiday destination for families, couples, friends and solo travelers. Thanks to its bullet trains, getting around is as convenient and speedy as ever, opening the way to a lot more city and town adventuring. Other popular ways to travel in Japan for 13 days are hiring a car, motorbike or bicycle, or even hiking your way around. A pre-packaged 13-day trip to Japan is also another option. Of course, you can also plan a customized Japan trip by connecting with our local travel experts.
More information:
Japan itineraries
10 days in Japan
Two weeks in Japan
Japan in a week
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21 days in Japan
Things to do in Japan
When to visit Japan